Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_4559Protein of unknown function DUF1667. (122 aa)    
Predicted Functional Partners:
CSCA_4558
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
    0.998
CSCA_0838
Pyridine nucleotide-disulfide oxidoreductase.
    0.976
CSCA_4557
FAD dependent oxidoreductase.
 
    0.959
CSCA_0837
Oxidoreductase.
 
    0.862
CSCA_4112
FAD dependent oxidoreductase.
 
    0.826
CSCA_3227
Glycerol-3-phosphate responsive antiterminator, GlpP.
 
    0.771
CSCA_4762
Glycerol-3-phosphate responsive antiterminator, GlpP.
 
    0.657
CSCA_4560
Protein of unknown function DUF1836.
       0.516
CSCA_1455
Integrase family protein; Belongs to the 'phage' integrase family.
   
    0.436
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.