Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_4572Carbon starvation protein CstA. (593 aa)    
Predicted Functional Partners:
CSCA_4573
Signal transduction histidine kinase, LytS.
 
   
 0.717
CSCA_4574
Two component transcriptional regulator, LytTR family.
 
   
 0.626
CSCA_0028
Capsular polysaccharide biosynthesis protein.
  
    0.465
ispH
Hydroxymethylbutenyl pyrophosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
     
 0.450
CSCA_2676
Pyridine nucleotide-disulfide oxidoreductase; Belongs to the sulfur carrier protein TusA family.
     
 0.449
CSCA_0265
Sugar ABC transporter ATP-binding/membrane protein; Belongs to the binding-protein-dependent transport system permease family.
   
    0.422
CSCA_1195
Monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
   
    0.422
CSCA_1196
Monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
   
    0.422
CSCA_1200
Monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
   
    0.422
CSCA_4197
Monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
   
    0.422
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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