Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_4573Signal transduction histidine kinase, LytS. (548 aa)    
Predicted Functional Partners:
CSCA_4574
Two component transcriptional regulator, LytTR family.
 
 0.996
CSCA_2294
Two component transcriptional regulator, LytTR family.
 
 
 0.871
CSCA_3881
Transcriptional regulator.
 
 
 0.869
CSCA_3459
Transcriptional regulator.
 
 
 0.867
CSCA_0890
Two component transcriptional regulator, LytTR family.
 
 
 0.866
CSCA_4214
Response regulator receiver domain protein.
 
 
 0.865
CSCA_3795
DNA-binding response regulator.
 
 
 0.864
CSCA_0281
Response regulator receiver domain protein.
 
 
 0.857
CSCA_2505
Two component transcriptional regulator, LytTR family.
 
 
 0.856
CSCA_1114
Two component transcriptional regulator, LytTR family.
 
 
 0.846
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.