fit to screen
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_4702Hypothetical protein. (324 aa)    
Predicted Functional Partners:
CSCA_4704
Group 1 glycosyl transferase.
 
  
 0.838
CSCA_4703
Hypothetical protein.
 
    
0.781
CSCA_3187
Protein of unknown function DUF115.
  
  
 0.669
CSCA_4701
Hypothetical protein.
 
     0.641
CSCA_4698
40-residue YVTN family beta-propeller repeat protein.
 
    0.487
CSCA_4720
Putative glycosyltransferase.
 
  
 0.462
CSCA_2435
Membrane-bound metal-dependent hydrolase.
  
     0.404
CSCA_4517
PAP2 family protein.
  
     0.404
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.