Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_4735Peptidase U32. (638 aa)    
Predicted Functional Partners:
CSCA_4738
3-octaprenyl-4hydroxybenzoate decarboxylase; Belongs to the UbiD family.
 
    0.800
CSCA_4739
4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
 
     0.788
CSCA_4736
Aminotransferase, class III.
 
    0.787
CSCA_4737
4-aminobutyrate aminotransferase-related aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.756
CSCA_0811
NADH dehydrogenase (quinone).
  
   0.710
CSCA_2650
NADH dehydrogenase (quinone).
  
   0.710
CSCA_4946
NADH dehydrogenase (quinone).
  
   0.695
CSCA_2877
O-methyltransferase family 3.
  
  
 0.669
CSCA_4733
ABC transporter, ATP-binding protein.
       0.662
CSCA_4734
ABC transporter, permease protein.
       0.662
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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