Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_4744Small acid-soluble spore protein alpha/beta family protein. (83 aa)    
Predicted Functional Partners:
CSCA_3952
Hypothetical protein.
  
     0.715
CSCA_4693
Single-strand binding family protein.
  
     0.677
hslO
Hsp33 protein; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.
  
    0.664
CSCA_4745
Methyltransferase type 12.
       0.648
CSCA_3955
Spore coat protein, CotS family.
  
     0.621
CSCA_4751
Putative sporulation protein YtxC.
  
    0.607
CSCA_4860
Hypothetical protein.
  
    0.605
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
   
 0.603
CSCA_4743
4-phytase.
       0.591
CSCA_4146
Hypothetical protein.
  
     0.555
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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