Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_4781Glycosyltransferase. (397 aa)    
Predicted Functional Partners:
CSCA_4780
Polysaccharide biosynthesis protein CapD.
 
  
 0.803
CSCA_4782
Glycosyltransferase.
 
     0.776
CSCA_4788
Nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.737
CSCA_4783
Glycosyltransferase.
 
  
 0.729
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.701
CSCA_0663
Putative cell wall binding repeat 2-containing protein.
  
     0.691
CSCA_3715
Ig domain protein.
  
     0.689
CSCA_3717
Putative cell wall binding repeat 2-containing protein.
  
     0.687
CSCA_2240
Cell wall binding repeat 2 family protein.
  
     0.685
CSCA_1563
Putative cell wall binding repeat 2-containing protein.
  
     0.680
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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