Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
CSCA_4887Anion transporter. (470 aa)    
Predicted Functional Partners:
CSCA_4888
Amidohydrolase.
       0.678
CSCA_4890
Dimethylmenaquinone methyltransferase.
 
     0.580
CSCA_4889
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding.
       0.564
CSCA_1819
PTS system, glucose-specific IIBC subunit.
  
  
 0.553
CSCA_4686
PTS system, glucose subfamily, IIA subunit.
  
  
 0.553
CSCA_4331
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
  
 0.549
CSCA_4726
FAD binding domain protein.
 
  
 0.519
CSCA_4333
Citrate lyase subunit alpha.
 
  
 0.508
CSCA_2063
Phosphate transporter.
   
 
 0.500
CSCA_2852
Phosphate transporter.
   
 
 0.500
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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