Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_4913Putative phage integrase family protein; Belongs to the 'phage' integrase family. (314 aa)    
Predicted Functional Partners:
CSCA_4914
Hypothetical protein.
       0.773
CSCA_1392
Integrase/recombinase (XerC/CodV family).
  
     0.769
CSCA_2447
Site-specific recombinase, phage integrase family.
  
     0.764
CSCA_1288
Site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
  
     0.698
CSCA_2768
Cell division FtsK/SpoIIIE.
 
   
 0.592
CSCA_4911
Hypothetical protein.
     
 0.520
CSCA_4912
Hypothetical protein.
       0.513
CSCA_3899
Hypothetical protein.
   
    0.482
CSCA_4910
Hypothetical protein.
       0.460
CSCA_1662
Prephenate dehydrogenase.
  
    0.444
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.