Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_4934Beta-lactamase domain protein. (396 aa)    
Predicted Functional Partners:
CSCA_0819
Flavin reductase domain protein FMN-binding.
  
 0.722
CSCA_4512
Desulfoferrodoxin.
 
  
 0.689
CSCA_1516
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
 
  
 0.666
CSCA_3276
Rubrerythrin.
 
  
 0.639
CSCA_2244
Rubredoxin-type Fe(Cys)4 protein.
 
  
 0.601
CSCA_2751
Nitrate reductase, NADH oxidase subunit.
 
  
 0.599
CSCA_0881
Hemerythrin-like metal-binding protein.
  
  
 0.589
CSCA_1041
Hemerythrin-like metal-binding domain protein.
  
  
 0.589
CSCA_4014
Nucleoside recognition domain protein.
   
    0.427
CSCA_0634
Nitrite and sulphite reductase 4Fe-4S region; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.409
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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