Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_4940Lytic transglycosylase catalytic. (191 aa)    
Predicted Functional Partners:
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
  
    0.881
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.769
CSCA_2828
Protein of unknown function DUF322.
   
    0.608
CSCA_3130
Flagellar basal body rod protein.
  
 
 0.582
CSCA_4037
Putative chemotaxis protein MotB.
 
  
 0.501
CSCA_4964
Penicillin-binding protein transpeptidase.
 
  
 0.491
CSCA_4963
Penicillin-binding protein transpeptidase.
 
  
 0.482
CSCA_3138
Bifunctional flagellar biosynthesis proteins FliR/FlhB; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
  
  
 0.460
CSCA_3129
Protein of unknown function DUF1078 domain protein.
  
 
 0.445
CSCA_2818
Protein of unknown function DUF177.
  
    0.436
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.