Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_4955Hypothetical protein. (242 aa)    
Predicted Functional Partners:
CSCA_3114
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
   
 
 0.697
CSCA_4954
Hypothetical protein.
  
    0.690
CSCA_2431
FtsA-related protein.
   
 
 0.681
ftsA
Hypothetical protein; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
   
 
 0.681
CSCA_5272
Diol/glycerol dehydratase reactivating factor large subunit.
   
 
 0.681
CSCA_4959
Cell shape determining protein, MreB/Mrl family.
   
 
 0.618
CSCA_4957
Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
    0.607
CSCA_4956
Hypothetical protein.
       0.599
CSCA_4958
DNA repair protein RadC; Belongs to the UPF0758 family.
  
  
 0.598
CSCA_4963
Penicillin-binding protein transpeptidase.
  
 
 0.572
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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