Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSCA_50304Fe-4S ferredoxin iron-sulfur binding domain protein. (67 aa)    
Predicted Functional Partners:
CSCA_3671
Isocitrate dehydrogenase (NAD(+)).
     
  0.900
CSCA_5031
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
 
    0.889
CSCA_5032
3-methyl-2-oxobutanoate dehydrogenase (ferredoxin).
 
    0.883
CSCA_5029
Hypothetical protein.
 
     0.871
CSCA_5033
Pyruvate ferredoxin/flavodoxin oxidoreductase.
 
    0.850
CSCA_1359
Glutamate dehydrogenase (NADP(+)); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
  0.806
CSCA_2756
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
  0.806
CSCA_0815
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
     
  0.800
CSCA_1881
Fumarate lyase.
     
  0.800
argH
Argininosuccinate lyase.
     
  0.800
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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