STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSCA_5277Flavoprotein. (270 aa)    
Predicted Functional Partners:
CSCA_5273
Propanediol dehydratase reactivation protein PduH.
 
     0.876
CSCA_5272
Diol/glycerol dehydratase reactivating factor large subunit.
 
    0.872
CSCA_5270
Dehydratase medium subunit.
 
    0.869
CSCA_5271
Dehydratase small subunit.
 
     0.865
CSCA_5269
Glycerol dehydratase.
 
    0.855
CSCA_5268
Microcompartments protein.
 
     0.851
CSCA_5279
ATP/cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
 
   
 0.851
CSCA_5280
Aldehyde Dehydrogenase.
 
   0.844
CSCA_5274
BMC domain protein.
 
     0.686
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
  
  
 0.676
Your Current Organism:
Clostridium scatologenes
NCBI taxonomy Id: 1548
Other names: ATCC 25775, Bacillus scatologenes, C. scatologenes, CCUG 9283, Clostridium scatol, DSM 757, NCIB 8855, NCIB:8855, NCTC 12992
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.