STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXO00940.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (833 aa)    
Predicted Functional Partners:
KXN98872.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.994
KXO00046.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 0.981
KXO01398.1
Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.872
KXO00939.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.869
KXO00936.1
Metal ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.857
KXO00938.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   
 0.848
KXO00935.1
Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.803
KXO00941.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.787
KXN98923.1
Metal ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.769
KXO00943.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
0.766
Your Current Organism:
Vitellibacter aquimaris
NCBI taxonomy Id: 1548749
Other names: Aequorivita aquimaris, Aequorivita sp. D-24, DSM 101732, KCTC 42708, V. aquimaris, Vitellibacter aquimaris Thevarajoo et al. 2016, Vitellibacter sp. D-24, strain D-24
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