STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXO00447.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (542 aa)    
Predicted Functional Partners:
KXN98303.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.591
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.582
KXN98871.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.539
KXO00368.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.534
KXO00036.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.534
KXN98788.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.521
KXO00366.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.518
KXO00503.1
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.
   
  0.491
KXO00670.1
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.
   
  0.491
KXO00019.1
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.491
Your Current Organism:
Vitellibacter aquimaris
NCBI taxonomy Id: 1548749
Other names: Aequorivita aquimaris, Aequorivita sp. D-24, DSM 101732, KCTC 42708, V. aquimaris, Vitellibacter aquimaris Thevarajoo et al. 2016, Vitellibacter sp. D-24, strain D-24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.