STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKJ78584.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (501 aa)    
Predicted Functional Partners:
KKJ78810.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.985
KKJ76930.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.955
KKJ76845.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.879
KKJ78585.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.762
KKJ78583.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.682
KKJ75605.1
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.578
KKJ76714.1
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.538
KKJ77738.1
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.512
KKJ78582.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.505
KKJ78781.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.490
Your Current Organism:
Kiloniella litopenaei
NCBI taxonomy Id: 1549748
Other names: K. litopenaei, Kiloniella sp. P1-1, LMG 27755, LMG:27755, MCCC 1A09869, strain P1-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.