STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKJ77909.1Chloromuconate cycloisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (394 aa)    
Predicted Functional Partners:
KKJ78783.1
Rhamnonate dehydratase; Catalyzes the formation of 2-keto-3-deoxy-L-rhamnonate from L-rhamnonate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
  
 0.892
KKJ77910.1
Trimethylamine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the trimethylamine methyltransferase family.
       0.615
KKJ75311.1
Isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
  
0.599
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
    
 0.595
KKJ76448.1
Dihydrodipicolinate synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DapA family.
    
 0.595
KKJ76946.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.579
KKJ78790.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.576
KKJ77908.1
N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.528
KKJ76443.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.525
KKJ78791.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.511
Your Current Organism:
Kiloniella litopenaei
NCBI taxonomy Id: 1549748
Other names: K. litopenaei, Kiloniella sp. P1-1, LMG 27755, LMG:27755, MCCC 1A09869, strain P1-1
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