STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKJ75634.1Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology. (1136 aa)    
Predicted Functional Partners:
KKJ77927.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.940
KKJ75636.1
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.938
KKJ75635.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.802
KKJ78343.1
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.738
KKJ77926.1
Restriction endonuclease EcoR124II subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.738
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.648
KKJ75633.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.622
KKJ78344.1
Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.592
KKJ78003.1
Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.591
KKJ78207.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.557
Your Current Organism:
Kiloniella litopenaei
NCBI taxonomy Id: 1549748
Other names: K. litopenaei, Kiloniella sp. P1-1, LMG 27755, LMG:27755, MCCC 1A09869, strain P1-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.