Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPN63099.1 | KPN63753.1 | AKJ29_10330 | AKJ29_14160 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily. | 0.484 |
KPN63753.1 | KPN63099.1 | AKJ29_14160 | AKJ29_10330 | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.484 |
KPN63753.1 | KPN63842.1 | AKJ29_14160 | AKJ29_14150 | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily. | Farnesyltranstransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family. | 0.720 |
KPN63753.1 | KPN63843.1 | AKJ29_14160 | AKJ29_14155 | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.852 |
KPN63753.1 | KPN64707.1 | AKJ29_14160 | AKJ29_05535 | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily. | 50S ribosomal protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.424 |
KPN63753.1 | hrcA | AKJ29_14160 | AKJ29_02860 | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily. | Heat-inducible transcription repressor; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.411 |
KPN63753.1 | rsmI | AKJ29_14160 | AKJ29_16370 | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily. | 16S rRNA methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.498 |
KPN63842.1 | KPN63753.1 | AKJ29_14150 | AKJ29_14160 | Farnesyltranstransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family. | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily. | 0.720 |
KPN63842.1 | KPN63843.1 | AKJ29_14150 | AKJ29_14155 | Farnesyltranstransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.720 |
KPN63843.1 | KPN63753.1 | AKJ29_14155 | AKJ29_14160 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily. | 0.852 |
KPN63843.1 | KPN63842.1 | AKJ29_14155 | AKJ29_14150 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Farnesyltranstransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family. | 0.720 |
KPN63843.1 | rsmI | AKJ29_14155 | AKJ29_16370 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 16S rRNA methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.498 |
KPN64707.1 | KPN63753.1 | AKJ29_05535 | AKJ29_14160 | 50S ribosomal protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily. | 0.424 |
hrcA | KPN63753.1 | AKJ29_02860 | AKJ29_14160 | Heat-inducible transcription repressor; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily. | 0.411 |
rsmI | KPN63753.1 | AKJ29_16370 | AKJ29_14160 | 16S rRNA methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily. | 0.498 |
rsmI | KPN63843.1 | AKJ29_16370 | AKJ29_14155 | 16S rRNA methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.498 |