STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPN64527.1Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)    
Predicted Functional Partners:
KPN64528.1
Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.990
KPN64529.1
MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.852
KPN63961.1
NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.658
KPN62395.1
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.615
KPN64525.1
MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.610
KPN64526.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.550
Your Current Organism:
Aliiroseovarius crassostreae
NCBI taxonomy Id: 154981
Other names: A. crassostreae, Aliiroseovarius crassostreae (Boettcher et al. 2005) Park et al. 2015, CVSP bacterium CV919-312, Crassostrea virginica symbiont, DSM 16950, Pseudoroseovarius crassostreae, Pseudoroseovarius crassostreae (Boettcher et al. 2005) Sun et al. 2015, Roseovarius crassostreae, Roseovarius crassostreae Boettcher et al. 2005, strain CV919-312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.