STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMW34636.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the DegT/DnrJ/EryC1 family. (375 aa)    
Predicted Functional Partners:
AMW34724.1
Aminotransferase DegT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
  
     0.775
AMW34633.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   0.727
AMW35506.1
D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily.
  
 
 0.718
AMW34639.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.713
AMW34635.1
Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.702
AMW34242.1
dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.681
AMW34634.1
3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.641
AMW34243.1
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.611
AMW34222.1
Nucleotide sugar dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.603
AMW34258.1
GDP-mannose dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.572
Your Current Organism:
Haematospirillum jordaniae
NCBI taxonomy Id: 1549855
Other names: CCUG 66838, DSM 28903, H. jordaniae, Haematospirillum jordaniae Humrighouse et al. 2016, Rhodospirillaceae bacterium H2509, Rhodospirillaceae bacterium H2784, Rhodospirillaceae bacterium H3173, Rhodospirillaceae bacterium H3694, Rhodospirillaceae bacterium H4485, Rhodospirillaceae bacterium H4555, Rhodospirillaceae bacterium H4833, Rhodospirillaceae bacterium H4890, Rhodospirillaceae bacterium H5569, Rhodospirillaceae bacterium H5791, Rhodospirillaceae bacterium H5945, Rhodospirillaceae bacterium H6167, Rhodospirillaceae bacterium H6172, Rhodospirillaceae bacterium H6179, strain H5569
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