STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMW34639.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (707 aa)    
Predicted Functional Partners:
AMW35596.1
Pseudaminic acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
AMW34640.1
UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.980
AMW34641.1
UDP-N-acetylglucosamine 4,6-dehydratase (inverting); Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.962
AMW34242.1
dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
    0.854
AMW34724.1
Aminotransferase DegT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.750
AMW34636.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.713
AMW34966.1
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.676
AMW35183.1
GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.645
AMW34642.1
Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.607
AMW34508.1
Mannose-1-phosphate guanylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.593
Your Current Organism:
Haematospirillum jordaniae
NCBI taxonomy Id: 1549855
Other names: CCUG 66838, DSM 28903, H. jordaniae, Haematospirillum jordaniae Humrighouse et al. 2016, Rhodospirillaceae bacterium H2509, Rhodospirillaceae bacterium H2784, Rhodospirillaceae bacterium H3173, Rhodospirillaceae bacterium H3694, Rhodospirillaceae bacterium H4485, Rhodospirillaceae bacterium H4555, Rhodospirillaceae bacterium H4833, Rhodospirillaceae bacterium H4890, Rhodospirillaceae bacterium H5569, Rhodospirillaceae bacterium H5791, Rhodospirillaceae bacterium H5945, Rhodospirillaceae bacterium H6167, Rhodospirillaceae bacterium H6172, Rhodospirillaceae bacterium H6179, strain H5569
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