STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY61457.1Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. (387 aa)    
Predicted Functional Partners:
SDY61484.1
Acyl-CoA dehydrogenase.
  
 
  0.813
SDY61514.1
3-hydroxybutyryl-CoA dehydrogenase.
    
  0.777
SDY61442.1
Alcohol dehydrogenase GroES-like domain-containing protein.
       0.773
SDY61501.1
Naphthoate synthase.
       0.773
SDY61424.1
cyclohexanecarboxylate-CoA ligase.
    
  0.701
SDY61540.1
3-hydroxyacyl-CoA dehydrogenase.
    
  0.690
SDY61563.1
2-deoxy-D-gluconate 3-dehydrogenase.
   
  0.677
SDX49971.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
    
 0.659
SDX65571.1
(R)-ethylmalonyl-CoA mutase.
    
 0.659
SDY61623.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family.
 
    
0.647
Your Current Organism:
Modestobacter sp. DSM 44400
NCBI taxonomy Id: 1550230
Other names: M. sp. DSM 44400
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