Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF09278.1 | SDF09300.1 | SAMN05660662_1071 | SAMN05660662_1072 | Hypothetical protein. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.532 |
SDF09278.1 | SDF09317.1 | SAMN05660662_1071 | SAMN05660662_1073 | Hypothetical protein. | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.532 |
SDF09278.1 | SDF09345.1 | SAMN05660662_1071 | SAMN05660662_1074 | Hypothetical protein. | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | 0.532 |
SDF09278.1 | SDF21007.1 | SAMN05660662_1071 | SAMN05660662_1351 | Hypothetical protein. | Hypothetical protein. | 0.665 |
SDF09278.1 | SDF27942.1 | SAMN05660662_1071 | SAMN05660662_1692 | Hypothetical protein. | Hypothetical protein. | 0.650 |
SDF09278.1 | SDF61820.1 | SAMN05660662_1071 | SAMN05660662_2763 | Hypothetical protein. | Hypothetical protein. | 0.701 |
SDF09278.1 | SDF76911.1 | SAMN05660662_1071 | SAMN05660662_3332 | Hypothetical protein. | Protein of unknown function. | 0.521 |
SDF09278.1 | SDG08257.1 | SAMN05660662_1071 | SAMN05660662_0253 | Hypothetical protein. | Protein of unknown function. | 0.534 |
SDF09278.1 | mca | SAMN05660662_1071 | SAMN05660662_1614 | Hypothetical protein. | Mycothiol S-conjugate amidase; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.505 |
SDF09278.1 | mshD | SAMN05660662_1071 | SAMN05660662_0402 | Hypothetical protein. | Mycothiol synthase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.540 |
SDF09300.1 | SDF09278.1 | SAMN05660662_1072 | SAMN05660662_1071 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.532 |
SDF09300.1 | SDF09317.1 | SAMN05660662_1072 | SAMN05660662_1073 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.832 |
SDF09300.1 | SDF09345.1 | SAMN05660662_1072 | SAMN05660662_1074 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | 0.858 |
SDF09317.1 | SDF09278.1 | SAMN05660662_1073 | SAMN05660662_1071 | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.532 |
SDF09317.1 | SDF09300.1 | SAMN05660662_1073 | SAMN05660662_1072 | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.832 |
SDF09317.1 | SDF09345.1 | SAMN05660662_1073 | SAMN05660662_1074 | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | 0.857 |
SDF09345.1 | SDF09278.1 | SAMN05660662_1074 | SAMN05660662_1071 | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | Hypothetical protein. | 0.532 |
SDF09345.1 | SDF09300.1 | SAMN05660662_1074 | SAMN05660662_1072 | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.858 |
SDF09345.1 | SDF09317.1 | SAMN05660662_1074 | SAMN05660662_1073 | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.857 |
SDF21007.1 | SDF09278.1 | SAMN05660662_1351 | SAMN05660662_1071 | Hypothetical protein. | Hypothetical protein. | 0.665 |
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