STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE34541.1Glutamate-1-semialdehyde 2,1-aminomutase. (443 aa)    
Predicted Functional Partners:
SDE34592.1
Porphobilinogen synthase.
 
 
 0.998
SDE34698.1
glutamyl-tRNA reductase.
 
 0.997
SDE34628.1
uroporphyrinogen-III synthase.
 
 
 0.981
SDE34663.1
Hydroxymethylbilane synthase.
 
  
 0.967
SDE34509.1
Broad specificity phosphatase PhoE.
  
    0.916
SDE84713.1
uroporphyrinogen-III C-methyltransferase.
 
  
 0.911
SDF18666.1
uroporphyrinogen-III C-methyltransferase.
 
  
 0.907
SDE34389.1
Cytochrome c-type biogenesis protein CcsB.
 
  
 0.856
SDE34449.1
Cytochrome c-type biogenesis protein.
  
  
 0.847
SDF19875.1
Aspartate kinase.
   
 
  0.804
Your Current Organism:
Blastococcus sp. DSM 44205
NCBI taxonomy Id: 1550233
Other names: B. sp. DSM 44205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.