STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARJ50715.1Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa)    
Predicted Functional Partners:
iolE
Myo-inosose-2 dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
iolD
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.
 
  
 0.972
iolG
Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.969
iolB
5-deoxy-glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.967
iolC
5-dehydro-2-deoxygluconokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.963
ARJ50470.1
Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.904
ARJ51545.1
Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.904
mmsA
Methylmalonate-semialdehyde dehydrogenase (CoA acylating); Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.854
ARJ50713.1
Solute:sodium symporter family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.691
ARJ50711.1
6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.679
Your Current Organism:
Staphylococcus lutrae
NCBI taxonomy Id: 155085
Other names: ATCC 700373, CCUG 38494, CIP 105399, DSM 10244, S. lutrae, strain M340/94/1
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