STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARJ50728.1DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)    
Predicted Functional Partners:
ARJ50727.1
Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
B5P37_03910
DNA-binding response regulator; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.901
ARJ51206.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.864
ARJ50730.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.861
ARJ50729.1
DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.859
ARJ49984.1
PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.840
ARJ51840.1
Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.835
ARJ51898.1
Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.830
walK
Cell wall metabolism sensor histidine kinase WalK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.660
ARJ50858.1
Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.610
Your Current Organism:
Staphylococcus lutrae
NCBI taxonomy Id: 155085
Other names: ATCC 700373, CCUG 38494, CIP 105399, DSM 10244, S. lutrae, strain M340/94/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.