STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARJ51356.1AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)    
Predicted Functional Partners:
ARJ51355.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.860
ARJ50367.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.536
ARJ51354.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.518
ARJ50782.1
IS21 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.467
ARJ50448.1
IS21 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.465
ARJ50087.1
IS21 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.461
B5P37_06330
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.449
ARJ51571.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.449
ARJ51651.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.449
ARJ50865.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.441
Your Current Organism:
Staphylococcus lutrae
NCBI taxonomy Id: 155085
Other names: ATCC 700373, CCUG 38494, CIP 105399, DSM 10244, S. lutrae, strain M340/94/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.