STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP93895.1Putative formate dehydrogenase oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (726 aa)    
Predicted Functional Partners:
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.906
GAP95776.1
Coenzyme F420-reducing hydrogenase related protein.
  
 0.869
GAP97679.1
Glutamate synthase [NADPH] large chain.
  
 0.822
GAP97815.1
Ferredoxin-dependent glutamate synthase.
  
 0.822
GAP96322.1
Hypothetical protein.
 
 0.779
GAP95237.1
Putative succinate dehydrogenase cytochrome b subunit.
    
 0.749
GAP97196.1
Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
 
 0.704
GAP95631.1
Cytochrome b6-f complex alternative Rieske iron sulfur protein PetC3.
   
 
 0.649
petC
Cytochrome b6-f complex iron-sulfur subunit PetC1; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
   
 
 0.649
GAP99416.1
Sulfur carrier protein adenylyltransferase ThiF.
    
 0.643
Your Current Organism:
Leptolyngbya sp. NIES2104
NCBI taxonomy Id: 1552121
Other names: L. sp. NIES-2104, Leptolyngbya sp. NIES-2104
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.