STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP93903.1Sirohydrochlorin cobaltochelatase. (242 aa)    
Predicted Functional Partners:
GAP97715.1
Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase.
 
  
 0.950
GAP96289.1
uroporphyrinogen-III methyltransferase / uroporphyrinogen-III synthase; Belongs to the precorrin methyltransferase family.
  
 
 0.941
GAP96290.1
uroporphyrinogen-III methyltransferase / uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
 
 0.941
GAP93813.1
Cobalt-precorrin-6y C5-methyltransferase / Cobalt-precorrin-6y C15-methyltransferase.
 
  
 0.928
GAP98094.1
Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase.
 
  
 0.924
GAP93902.1
uroporphyrinogen-III methyltransferase; Belongs to the precorrin methyltransferase family.
  
 
 0.867
GAP98093.1
Cobalt-precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.839
cbiA
Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
  
 0.799
GAP97304.1
Cobalt-precorrin-6y C15-methyltransferase.
 
  
 0.742
GAP93814.1
Cobalt-precorrin-6x reductase.
 
  
 0.724
Your Current Organism:
Leptolyngbya sp. NIES2104
NCBI taxonomy Id: 1552121
Other names: L. sp. NIES-2104, Leptolyngbya sp. NIES-2104
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