STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP96244.1Trk system potassium uptake protein TrkA. (225 aa)    
Predicted Functional Partners:
GAP98190.1
Potassium uptake protein, integral membrane component, KtrB.
  
 
 0.810
GAP96245.1
Protein of unknown function DUF820.
       0.773
GAP98454.1
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.651
GAP96380.1
Na+/H+ antiporter.
  
   
 0.650
GAP96243.1
Hypothetical protein.
       0.610
GAP95195.1
Molybdenum cofactor biosynthesis protein MoaE.
   
    0.570
GAP97105.1
Molybdopterin binding motif, CinA N-terminal domain / C-terminal domain of CinA type S; Belongs to the CinA family.
    
 0.548
nadE
NAD synthetase / Glutamine amidotransferase chain of NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
  0.527
GAP96242.1
Histone acetyltransferase HPA2 and related acetyltransferases.
       0.513
GAP98821.1
Chloride channel protein.
  
  
 0.510
Your Current Organism:
Leptolyngbya sp. NIES2104
NCBI taxonomy Id: 1552121
Other names: L. sp. NIES-2104, Leptolyngbya sp. NIES-2104
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.