STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP98843.1Hypothetical protein. (62 aa)    
Predicted Functional Partners:
GAP98844.1
Hypothetical protein.
       0.773
GAP98841.1
GCN5-related N-acetyltransferase.
       0.768
GAP98842.1
Hypothetical protein.
       0.768
GAP95048.1
Endo-1,4-beta-xylanase A precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.739
GAP98840.1
IMP dehydrogenase/GMP reductase.
       0.548
GAP96217.1
Glycosyl transferase, family 2.
  
 
 0.477
GAP98845.1
Probable RND efflux membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.477
GAP98846.1
RND multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.466
GAP93529.1
Glycosyl transferase, family 2.
   
 
  0.400
GAP93547.1
Hypothetical protein.
   
 
  0.400
Your Current Organism:
Leptolyngbya sp. NIES2104
NCBI taxonomy Id: 1552121
Other names: L. sp. NIES-2104, Leptolyngbya sp. NIES-2104
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.