STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EP57_10320Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)    
Predicted Functional Partners:
EP57_10315
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.781
EP57_10325
Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.
 
     0.602
EP57_10455
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.570
EP57_11865
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.568
EP57_16175
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.544
EP57_13515
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.537
EP57_09935
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.530
EP57_11855
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.530
EP57_04835
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.526
EP57_03365
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.524
Your Current Organism:
Listeria booriae
NCBI taxonomy Id: 1552123
Other names: CIP 111022, DSM 28860, L. booriae, LMG 28311, LMG:28311, Listeria booriae Weller et al. 2015, Listeriaceae bacterium FSL A5-0281, NCTC 13936, strain FSL A5-0281
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.