STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DL764_008434Nefa_Nip30_N domain-containing protein. (299 aa)    
Predicted Functional Partners:
DL764_006801
Uncharacterized protein.
    
   0.866
DL764_005719
Uncharacterized protein.
    
   0.866
DL764_003275
MPN domain-containing protein.
    
   0.866
DL764_004562
RRM domain-containing protein.
   
   0.612
DL764_005766
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
   0.606
DL764_000437
Uncharacterized protein.
   
   0.606
DL764_008535
Uncharacterized protein.
    
 
 0.605
DL764_007306
Uncharacterized protein.
    
 
 0.598
DL764_010343
Tr-type G domain-containing protein.
    
   0.597
DL764_009200
WD_REPEATS_REGION domain-containing protein.
    
   0.597
Your Current Organism:
Monosporascus ibericus
NCBI taxonomy Id: 155417
Other names: AG224, CBS 110550, M. ibericus, MA Fungi 48050, Monosporascus ibericus Collado, Ant. Gonzalez, Stchigel, Guarro & Pelaez, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.