STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DL764_006450RRM domain-containing protein. (1854 aa)    
Predicted Functional Partners:
DL764_001309
WD_REPEATS_REGION domain-containing protein.
   
 0.877
DL764_003415
Hist_deacetyl domain-containing protein.
    
 0.822
DL764_010698
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.822
DL764_001865
Uncharacterized protein.
   
 0.820
DL764_003954
TFIID_20kDa domain-containing protein.
    
 0.817
DL764_008106
SCA7 domain-containing protein.
    
 0.815
DL764_003334
Uncharacterized protein.
    
 0.807
DL764_005584
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.801
DL764_008489
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.798
DL764_007585
Uncharacterized protein.
    
 0.798
Your Current Organism:
Monosporascus ibericus
NCBI taxonomy Id: 155417
Other names: AG224, CBS 110550, M. ibericus, MA Fungi 48050, Monosporascus ibericus Collado, Ant. Gonzalez, Stchigel, Guarro & Pelaez, 2002
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.