STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIP_0806butyryl-CoA dehydrogenase. (404 aa)    
Predicted Functional Partners:
LIP_1949
Electron transfer flavoprotein subunit alpha.
 
 0.957
LIP_0224
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.953
LIP_0228
Electron transfer flavoprotein subunit alpha.
 
 0.927
LIP_0227
Electron transfer flavoprotein subunit beta.
 
 0.906
LIP_1948
Electron transfer flavoprotein subunit beta.
 
 0.875
LIP_0223
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.814
LIP_3217
enoyl-CoA hydratase.
 
 0.737
LIP_0021
enoyl-CoA hydratase/carnithine racemase.
 0.735
LIP_0140
3-hydroxybutyryl-CoA dehydrogenase.
 
 0.720
LIP_3128
3-hydroxybutyryl-CoA dehydrogenase.
 
 0.705
Your Current Organism:
Limnochorda pilosa
NCBI taxonomy Id: 1555112
Other names: DSM 28787, L. pilosa, Limnochorda pilosa Watanabe et al. 2015, NBRC 110152, bacterium HC45, strain HC45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.