LIP_2241 protein (Limnochorda pilosa) - STRING interaction network

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Predicted Interactions

gene neighborhood

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textmining

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protein homology

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[Homology]

Score

LIP_2241

ATPase AAA. (57 aa)

Predicted Functional Partners:

LIP_3619

0.909

LIP_2899

0.826

LIP_2240

0.552

polA

0.463

LIP_1560

0.461

topA

0.422

Your Current Organism:

Limnochorda pilosa

NCBI taxonomy Id: 1555112
Other names: DSM 28787, L. pilosa, Limnochorda pilosa Watanabe et al. 2015, NBRC 110152, bacterium HC45, strain HC45

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LIP_1560	LIP_2241	LIP_1560	LIP_2241	Integrase.	ATPase AAA.	0.461
LIP_1560	LIP_2899	LIP_1560	LIP_2899	Integrase.	Integrase catalytic subunit.	0.475
LIP_2240	LIP_2241	LIP_2240	LIP_2241	Hypothetical protein.	ATPase AAA.	0.552
LIP_2241	LIP_1560	LIP_2241	LIP_1560	ATPase AAA.	Integrase.	0.461
LIP_2241	LIP_2240	LIP_2241	LIP_2240	ATPase AAA.	Hypothetical protein.	0.552
LIP_2241	LIP_2899	LIP_2241	LIP_2899	ATPase AAA.	Integrase catalytic subunit.	0.826
LIP_2241	LIP_3619	LIP_2241	LIP_3619	ATPase AAA.	Helicase DnaB.	0.909
LIP_2241	polA	LIP_2241	LIP_1497	ATPase AAA.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.	0.463
LIP_2241	topA	LIP_2241	LIP_1645	ATPase AAA.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.422
LIP_2899	LIP_1560	LIP_2899	LIP_1560	Integrase catalytic subunit.	Integrase.	0.475
LIP_2899	LIP_2241	LIP_2899	LIP_2241	Integrase catalytic subunit.	ATPase AAA.	0.826
LIP_3619	LIP_2241	LIP_3619	LIP_2241	Helicase DnaB.	ATPase AAA.	0.909
LIP_3619	polA	LIP_3619	LIP_1497	Helicase DnaB.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.	0.519
LIP_3619	topA	LIP_3619	LIP_1645	Helicase DnaB.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.646
polA	LIP_2241	LIP_1497	LIP_2241	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.	ATPase AAA.	0.463
polA	LIP_3619	LIP_1497	LIP_3619	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.	Helicase DnaB.	0.519
polA	topA	LIP_1497	LIP_1645	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.855
topA	LIP_2241	LIP_1645	LIP_2241	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	ATPase AAA.	0.422
topA	LIP_3619	LIP_1645	LIP_3619	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	Helicase DnaB.	0.646
topA	polA	LIP_1645	LIP_1497	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.	0.855