LIP_3507 protein (Limnochorda pilosa) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

LIP_3507

Hypothetical protein. (224 aa)

Predicted Functional Partners:

LIP_3506

0.923

rpoC

0.787

rpoB

0.771

LIP_0821

0.641

rpoA

0.524

LIP_3508

0.475

LIP_1599

0.429

LIP_3505

0.424

Your Current Organism:

Limnochorda pilosa

NCBI taxonomy Id: 1555112
Other names: DSM 28787, L. pilosa, Limnochorda pilosa Watanabe et al. 2015, NBRC 110152, bacterium HC45, strain HC45

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LIP_0821	LIP_3507	LIP_0821	LIP_3507	Chemotaxis protein CheR.	Hypothetical protein.	0.641
LIP_1599	LIP_3507	LIP_1599	LIP_3507	Serine/threonine protein kinase.	Hypothetical protein.	0.429
LIP_3505	LIP_3506	LIP_3505	LIP_3506	Hypothetical protein.	Hypothetical protein.	0.547
LIP_3505	LIP_3507	LIP_3505	LIP_3507	Hypothetical protein.	Hypothetical protein.	0.424
LIP_3506	LIP_3505	LIP_3506	LIP_3505	Hypothetical protein.	Hypothetical protein.	0.547
LIP_3506	LIP_3507	LIP_3506	LIP_3507	Hypothetical protein.	Hypothetical protein.	0.923
LIP_3506	LIP_3508	LIP_3506	LIP_3508	Hypothetical protein.	Radical SAM protein.	0.470
LIP_3507	LIP_0821	LIP_3507	LIP_0821	Hypothetical protein.	Chemotaxis protein CheR.	0.641
LIP_3507	LIP_1599	LIP_3507	LIP_1599	Hypothetical protein.	Serine/threonine protein kinase.	0.429
LIP_3507	LIP_3505	LIP_3507	LIP_3505	Hypothetical protein.	Hypothetical protein.	0.424
LIP_3507	LIP_3506	LIP_3507	LIP_3506	Hypothetical protein.	Hypothetical protein.	0.923
LIP_3507	LIP_3508	LIP_3507	LIP_3508	Hypothetical protein.	Radical SAM protein.	0.475
LIP_3507	rpoA	LIP_3507	LIP_3244	Hypothetical protein.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.524
LIP_3507	rpoB	LIP_3507	LIP_3279	Hypothetical protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.771
LIP_3507	rpoC	LIP_3507	LIP_3278	Hypothetical protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.787
LIP_3508	LIP_3506	LIP_3508	LIP_3506	Radical SAM protein.	Hypothetical protein.	0.470
LIP_3508	LIP_3507	LIP_3508	LIP_3507	Radical SAM protein.	Hypothetical protein.	0.475
rpoA	LIP_3507	LIP_3244	LIP_3507	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Hypothetical protein.	0.524
rpoA	rpoB	LIP_3244	LIP_3279	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	LIP_3244	LIP_3278	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999