STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JP36_02880Proline:sodium symporter PutP; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (501 aa)    
Predicted Functional Partners:
JP36_02875
Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
  
 0.994
JP36_06855
Aerobic respiration control protein.
  
 
 0.885
JP36_06640
Hypothetical protein.
   
 
 0.745
JP36_11030
Acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.662
JP36_09395
Carbon starvation protein CstA.
  
    0.631
JP36_00400
Transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
  
  
 0.520
acsA
3-hydroxypropionyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.486
JP36_00075
Hypothetical protein.
  
  
 0.481
JP36_01345
Amino acid ABC transporter ATPase.
  
  
 0.471
gabD
Succinate-semialdehyde dehydrogenase; Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Belongs to the aldehyde dehydrogenase family.
  
 
 0.471
Your Current Organism:
Gallibacterium genomosp. 1
NCBI taxonomy Id: 155515
Other names: G. genomosp. 1, Gallibacterium genomospecies 1, Salpingitia sp. CCM 5974, Salpingitia sp. CCM 5975, Salpingitia sp. Gerl.2740/89
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