STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbpCFerric transporter ATP-binding subunit; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. (352 aa)    
Predicted Functional Partners:
JP36_03470
Iron ABC transporter permease.
 
 
 0.964
JP36_03560
Spermidine/putrescine ABC transporter permease.
 
 
  0.887
JP36_03555
Spermidine/putrescine ABC transporter permease.
 
  0.861
JP36_01970
Peptide ABC transporter ATP-binding protein; Involved in resistance to antimibial peptides; Belongs to the ABC transporter superfamily.
 
   
0.852
JP36_05260
Spermidine/putrescine ABC transporter permease.
  0.807
JP36_03935
Membrane protein.
 
   
  0.795
potC
Spermidine/putrescine ABC transporter permease; Can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotC is a membrane component.
 
 
  0.792
JP36_03930
Membrane protein.
 
   
  0.781
JP36_04945
Hypothetical protein.
 
 
 0.773
JP36_03460
Acid phosphatase; Belongs to the class B bacterial acid phosphatase family.
       0.752
Your Current Organism:
Gallibacterium genomosp. 1
NCBI taxonomy Id: 155515
Other names: G. genomosp. 1, Gallibacterium genomospecies 1, Salpingitia sp. CCM 5974, Salpingitia sp. CCM 5975, Salpingitia sp. Gerl.2740/89
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.