STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JP36_08520Hypothetical protein. (585 aa)    
Predicted Functional Partners:
JP36_06050
Hypothetical protein.
  
  
 0.714
JP36_07365
Hypothetical protein; Required for resistance to DNA-damaging agents. Belongs to the universal stress protein A family.
  
 
   0.526
JP36_03745
Hypothetical protein.
  
  
 0.474
JP36_05370
NAD(P)H nitroreductase.
  
  
 0.474
JP36_10305
NADPH-dependent; oxygen-insensitive; catalyzes the reduction of nitroaromatic compounds; Belongs to the flavin oxidoreductase frp family.
  
  
 0.474
matP
Ter macrodomain organizer matS-binding protein; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain.
  
     0.470
JP36_08515
Epimerase.
       0.457
JP36_00445
Hypothetical protein.
  
     0.443
JP36_08505
Hypothetical protein.
       0.425
argR
Arginine repressor; Regulates arginine biosynthesis genes.
       0.425
Your Current Organism:
Gallibacterium genomosp. 1
NCBI taxonomy Id: 155515
Other names: G. genomosp. 1, Gallibacterium genomospecies 1, Salpingitia sp. CCM 5974, Salpingitia sp. CCM 5975, Salpingitia sp. Gerl.2740/89
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.