STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JP36_09005Hypothetical protein. (131 aa)    
Predicted Functional Partners:
JP36_08790
Hypothetical protein.
  
 
 0.848
JP36_08830
Tail sheath protein.
  
   0.773
JP36_08795
Baseplate assembly protein.
  
  
 0.678
JP36_08860
gpD; D protein; bacteriophage P2-like virions include a head and a tail; D protein contributes to tail formation.
  
  
 0.670
JP36_08800
Tail protein.
  
  
 0.664
JP36_08835
Major tail tube protein.
  
  
 0.662
JP36_08855
Oxidoreductase.
  
  
 0.638
JP36_10280
Baseplate J protein.
   
   0.624
JP36_08740
Hypothetical protein.
  
    0.534
JP36_09065
Tail protein.
  
    0.534
Your Current Organism:
Gallibacterium genomosp. 1
NCBI taxonomy Id: 155515
Other names: G. genomosp. 1, Gallibacterium genomospecies 1, Salpingitia sp. CCM 5974, Salpingitia sp. CCM 5975, Salpingitia sp. Gerl.2740/89
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.