STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JP36_09080Oxidoreductase. (344 aa)    
Predicted Functional Partners:
JP36_09075
Terminase.
 
    0.974
JP36_09085
gpO; O protein; structural capsid protein; bacteriophage P2-like virions include a head and a tail; gpO is required for assembly of proheads.
 
    0.974
JP36_09090
Terminase.
 
    0.945
JP36_09070
Phage head protein.
 
    0.933
JP36_08710
Portal vertex protein; gpQ; Q protein; structural capsid protein; bacteriophage P2-like virions include a head and a tail; Q is a connector or portal protein that joins phage head and tail; Q, P and M proteins are needed to package DNA into proheads and for the conversion of proheads to capsids.
 
  
 0.929
JP36_08840
Tail protein.
 
    0.926
JP36_08855
Oxidoreductase.
  
    0.923
JP36_08935
Replication protein.
  
    0.913
JP36_08715
Terminase.
 
    0.892
JP36_08720
Hypothetical protein.
 
    0.892
Your Current Organism:
Gallibacterium genomosp. 1
NCBI taxonomy Id: 155515
Other names: G. genomosp. 1, Gallibacterium genomospecies 1, Salpingitia sp. CCM 5974, Salpingitia sp. CCM 5975, Salpingitia sp. Gerl.2740/89
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