STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JP36_10035DNA-binding protein. (88 aa)    
Predicted Functional Partners:
JP36_10040
Transposase.
 
     0.909
JP36_10050
Transcriptional regulator.
 
     0.807
JP36_10130
Hypothetical protein.
 
     0.786
JP36_10220
Hypothetical protein.
 
     0.757
JP36_10275
Hypothetical protein.
 
     0.751
JP36_10265
Hypothetical protein.
 
     0.748
JP36_10070
Host-nuclease inhibitor protein Gam.
 
     0.741
JP36_10260
Hypothetical protein.
 
     0.738
JP36_10190
Mu bacteriophage protein gp29.
 
     0.737
JP36_10235
Tail sheath protein.
 
     0.735
Your Current Organism:
Gallibacterium genomosp. 1
NCBI taxonomy Id: 155515
Other names: G. genomosp. 1, Gallibacterium genomospecies 1, Salpingitia sp. CCM 5974, Salpingitia sp. CCM 5975, Salpingitia sp. Gerl.2740/89
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.