STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JP36_10245Hypothetical protein. (114 aa)    
Predicted Functional Partners:
JP36_10240
Phage tail protein.
  
    0.779
JP36_10235
Tail sheath protein.
  
    0.752
JP36_10250
Hypothetical protein.
       0.752
JP36_10215
Hypothetical protein.
       0.746
JP36_10220
Hypothetical protein.
       0.746
JP36_10225
Hypothetical protein.
       0.746
JP36_10230
Hypothetical protein.
       0.746
JP36_10205
Hypothetical protein.
       0.731
JP36_10210
Head protein.
       0.731
JP36_10260
Hypothetical protein.
  
    0.618
Your Current Organism:
Gallibacterium genomosp. 1
NCBI taxonomy Id: 155515
Other names: G. genomosp. 1, Gallibacterium genomospecies 1, Salpingitia sp. CCM 5974, Salpingitia sp. CCM 5975, Salpingitia sp. Gerl.2740/89
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.