Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
JP36_00170 | JP36_02445 | JP36_00170 | JP36_02445 | D-erythro-7,8-dihydroneopterin triphosphate epimerase. | Protein-disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.428 |
JP36_00170 | hflD | JP36_00170 | JP36_10855 | D-erythro-7,8-dihydroneopterin triphosphate epimerase. | Lysogenization regulator; HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis. | 0.647 |
JP36_00210 | JP36_02445 | JP36_00210 | JP36_02445 | LOG family protein. | Protein-disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.456 |
JP36_00210 | JP36_08630 | JP36_00210 | JP36_08630 | LOG family protein. | Hypothetical protein. | 0.674 |
JP36_00210 | JP36_10860 | JP36_00210 | JP36_10860 | LOG family protein. | Adenylosuccinate lyase; Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.557 |
JP36_00210 | hflD | JP36_00210 | JP36_10855 | LOG family protein. | Lysogenization regulator; HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis. | 0.635 |
JP36_02445 | JP36_00170 | JP36_02445 | JP36_00170 | Protein-disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | D-erythro-7,8-dihydroneopterin triphosphate epimerase. | 0.428 |
JP36_02445 | JP36_00210 | JP36_02445 | JP36_00210 | Protein-disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | LOG family protein. | 0.456 |
JP36_02445 | JP36_07155 | JP36_02445 | JP36_07155 | Protein-disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | Hypothetical protein. | 0.625 |
JP36_02445 | JP36_08630 | JP36_02445 | JP36_08630 | Protein-disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | Hypothetical protein. | 0.592 |
JP36_02445 | hflD | JP36_02445 | JP36_10855 | Protein-disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | Lysogenization regulator; HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis. | 0.690 |
JP36_02445 | rnt | JP36_02445 | JP36_03485 | Protein-disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis. | 0.436 |
JP36_02445 | zipA | JP36_02445 | JP36_08095 | Protein-disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. | 0.619 |
JP36_07155 | JP36_02445 | JP36_07155 | JP36_02445 | Hypothetical protein. | Protein-disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.625 |
JP36_07155 | JP36_08630 | JP36_07155 | JP36_08630 | Hypothetical protein. | Hypothetical protein. | 0.496 |
JP36_07155 | hflD | JP36_07155 | JP36_10855 | Hypothetical protein. | Lysogenization regulator; HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis. | 0.690 |
JP36_07155 | zipA | JP36_07155 | JP36_08095 | Hypothetical protein. | Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. | 0.449 |
JP36_08630 | JP36_00210 | JP36_08630 | JP36_00210 | Hypothetical protein. | LOG family protein. | 0.674 |
JP36_08630 | JP36_02445 | JP36_08630 | JP36_02445 | Hypothetical protein. | Protein-disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.592 |
JP36_08630 | JP36_07155 | JP36_08630 | JP36_07155 | Hypothetical protein. | Hypothetical protein. | 0.496 |
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