STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9X013t-SNARE coiled-coil homology domain-containing protein. (104 aa)    
Predicted Functional Partners:
A0A4P9WZQ5
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.961
A0A4P9X6H7
t-SNARE coiled-coil homology domain-containing protein.
   
 0.953
A0A4P9XAX4
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
   
 0.950
A0A4P9X3W4
Uncharacterized protein.
    
 0.949
A0A4P9XE26
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.949
A0A4P9X2Q8
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.942
A0A4P9X435
Uncharacterized protein.
    
 0.938
A0A4P9XCJ1
Uncharacterized protein.
    
 0.932
A0A4P9X4M2
Uncharacterized protein.
   
 0.931
A0A4P9XCN6
V-SNARE coiled-coil homology domain-containing protein.
    
 0.926
Your Current Organism:
Caulochytrium protostelioides
NCBI taxonomy Id: 1555241
Other names: C. protostelioides
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