STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9X0U3Uncharacterized protein. (741 aa)    
Predicted Functional Partners:
A0A4P9XA80
Uncharacterized protein.
    
 0.961
A0A4V1IT71
Ras-domain-containing protein.
    
 0.940
A0A4P9X011
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.913
A0A4P9X9Q6
Uncharacterized protein.
    
 0.820
A0A4P9X1E2
Uncharacterized protein.
    
 0.794
A0A4P9X932
Uncharacterized protein.
    
 0.794
A0A4V1IUF4
Uncharacterized protein.
    
 0.787
A0A4P9WXE3
Gdp-bound Ypt7p At 1.35 A resolution.
    
 0.779
A0A4P9X2A7
Uncharacterized protein.
     
 0.774
A0A4P9XDI9
Uncharacterized protein.
    
 0.764
Your Current Organism:
Caulochytrium protostelioides
NCBI taxonomy Id: 1555241
Other names: C. protostelioides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.