STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9X1R8Uncharacterized protein. (457 aa)    
Predicted Functional Partners:
A0A4P9XGB6
Uncharacterized protein.
 
 
    0.899
A0A4P9XAB8
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
 
 0.675
A0A4P9WXC2
DUF382-domain-containing protein.
 
    
 0.572
A0A4P9X381
Ribosomal protein L6.
 
 
    0.555
A0A4P9X4H0
Uncharacterized protein.
   
    0.535
A0A4P9XAF7
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.535
A0A4P9XFF3
J domain-containing protein.
   
  
 0.480
A0A4P9X3U2
WD_REPEATS_REGION domain-containing protein.
   
    0.479
A0A4P9X6K9
Uncharacterized protein.
   
    0.463
A0A4P9XC97
Brix domain-containing protein.
   
    0.463
Your Current Organism:
Caulochytrium protostelioides
NCBI taxonomy Id: 1555241
Other names: C. protostelioides
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